Insertion junction: CLIP2.026913_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026913
Chromosome:chromosome 2
Location:3952961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102350 ATG3,APG3 Autophagy-related protein; (1 of 1) K08343 - ubiquitin-like-conjugating enzyme ATG3 (ATG3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGAACAACACAGGTACTCAGGCCTTAACAAGCGGGGGGCGGGTTCGC
Internal bar code:GTTATTTCGTGAATGTTACAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3374
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTACGATGCTGGCTCAT
Suggested primer 2:CAAACTCGCTGTTGGGGTTG