Insertion junction: CLIP2.027068_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027068
Chromosome:chromosome 10
Location:6131161
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g462250 REF1 RNA Export Factor; (1 of 1) K12881 - THO complex subunit 4 (THOC4, ALY) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGATGCCTTGTCGGAAAAGACTCGGGCTACAGCATCGAACTTACCG
Internal bar code:TAGTACAACATCTATAAGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1829
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGAGAGGCGAGAGAGGAG
Suggested primer 2:GCTATGTCGCTGGATGAGCT