| Common name: | REF1 |
| Defline: | RNA Export Factor; (1 of 1) K12881 - THO complex subunit 4 (THOC4, ALY) |
| Description: | Nuclear protein that binds to RNA and to Mex67p, required for export of poly(A)+ mRNA from the nucleus; member of the REF (RNA and export factor binding proteins) family; homologue of YRA1 and YRA2 yeast proteins. Contains one RNA recognition motif (RRM); null-allele mutant was isolated (PMID 29743196) |
| Synonyms: | g11331.t1,Cre10.g462250.t1.1,REF1 |
| Chromosome: | chromosome 10 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.008570_1 | CLIP2.008570 | intron | 80 | 6.1 |
| CLIP2.027068_1 | CLIP2.027068 | intron | 80 | 6.1 |
| CLIP2.027068_2 | CLIP2.027068 | intron | 80 | 6.1 |
| CLIP2.046831_1 | CLIP2.046831 | intron | 80 | 6.1 |
| CLIP2.057558_1 | CLIP2.057558 | 3'UTR | 80 | 6.1 |
| CLIP2.057558_2 | CLIP2.057558 | 3'UTR | 80 | 6.1 |
| CLIP2.076652_1 | CLIP2.076652 | 3'UTR | 80 | 6.1 |
| CLIP2.076652_2 | CLIP2.076652 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.217718_1 | LMJ.RY0402.217718 | intron | 95 | 5.5 |
| LMJ.RY0402.217718_2 | LMJ.RY0402.217718 | intron | 95 | 5.5 |
| PFAM: | PF00076 |
| PANTHER: | PTHR19965 |
| KEGG_ec: | |
| KEGG_orthology: | K12881 |
| KOG: | KOG0533 |
| Gene ontology terms:: | GO:0003676 |
| Best arabidopsis TAIR name: | AT5G59950 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.