Insertion junction: CLIP2.057558_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057558
Chromosome:chromosome 10
Location:6127635
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g462200 HDA17,SRTA1,SRTA Sir2-like NADH dependent histone deacetylase; (1 of 1) K11416 - mono-ADP-ribosyltransferase sirtuin 6 (SIRT6, SIR2L6) 3'UTR
Cre10.g462250 REF1 RNA Export Factor; (1 of 1) K12881 - THO complex subunit 4 (THOC4, ALY) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTTGCGGTACCGGTCCCACGCCCCGGCCCGTTCTAGACGTCGATGTA
Internal bar code:TGGCATCCGCGGGGGCTTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2411
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGTGAGTTCTTACGCGG
Suggested primer 2:GGGCTGCATGGACTGTACTT