Insertion junction: CLIP2.027199_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027199
Chromosome:chromosome 1
Location:5567804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039650 PDF1C (1 of 3) 3.5.1.88 - Peptide deformylase / Polypeptide deformylase; Peptide deformylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCACCGTGTCGGCCTGGCGTGAAGAGGGGGCAGAGGAGGCCGACAAG
Internal bar code:GTCTGTAAGTCCCCGGTCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:839
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGGGGGAAGCGTAGACG
Suggested primer 2:GTTCTGAGCTGGGTTTGGGA