| Common name: | PDF1C |
| Defline: | (1 of 3) 3.5.1.88 - Peptide deformylase / Polypeptide deformylase; Peptide deformylase |
| Description: | Polypeptide deformylase,removes formyl group from initiator Met; organelle targetted; highly similar to nearby PDF1B but seems to lack N-terminal part and shows very low expression level: could be a pseudogene |
| Synonyms: | g886.t1,Cre01.g039650.t1.1 |
| Chromosome: | chromosome 1 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.027199_1 | CLIP2.027199 | intron | 80 | 6.1 |
| CLIP2.027199_2 | CLIP2.027199 | intron | 80 | 6.1 |
| CLIP2.034682_1 | CLIP2.034682 | intron | 80 | 6.1 |
| CLIP2.034682_2 | CLIP2.034682 | intron | 80 | 6.1 |
| CLIP2.036972_1 | CLIP2.036972 | intron | 80 | 6.1 |
| CLIP2.036972_2 | CLIP2.036972 | intron | 80 | 6.1 |
| CLIP2.041905_1 | CLIP2.041905 | intron | 80 | 6.1 |
| CLIP2.041905_2 | CLIP2.041905 | intron | 80 | 6.1 |
| CLIP2.051894_1 | CLIP2.051894 | intron | 80 | 6.1 |
| CLIP2.051894_2 | CLIP2.051894 | intron | 80 | 6.1 |
| LMJ.RY0402.097485_1 | LMJ.RY0402.097485 | intron | 58 | 5.5 |
| LMJ.RY0402.242559_1 | LMJ.RY0402.242559 | intron | 58 | 5.5 |
| PFAM: | PF01327 |
| PANTHER: | PTHR10458 |
| KEGG_ec: | EC:3.5.1.88 |
| KEGG_orthology: | K01462 |
| KOG: | |
| Gene ontology terms:: | GO:0005506, GO:0042586 |
| Best arabidopsis TAIR name: | AT5G14660 |
| Best arabidopsis TAIR symbol: | ATDEF2,DEF2,PDF1B |
| Best arabidopsis TAIR defline: | peptide deformylase 1B |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.