Insertion junction: CLIP2.027458_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027458
Chromosome:chromosome 13
Location:1297194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571050 High mobility group protein; (1 of 1) PF00505//PF01388 - HMG (high mobility group) box (HMG_box) // ARID/BRIGHT DNA binding domain (ARID) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACATCCAGCAGCAGCACGACCAGCAGCTTCAACCGCAACCGCAACTG
Internal bar code:GCTTTATCTCATAAGGCGCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4784
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCGTTGCGTATATTGCG
Suggested primer 2:CAGCGCAACAGCAGCAAATA