Gene: Cre13.g571050

Overview

Common name:
Defline:	High mobility group protein; (1 of 1) PF00505//PF01388 - HMG (high mobility group) box (HMG_box) // ARID/BRIGHT DNA binding domain (ARID)
Description:	High mobility group protein, non-histone component of chromatin. ChromoDB HMGB347
Synonyms:	g14044.t1
Chromosome:	chromosome 13

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

Bait ID	Bait Name	Prey ID	Prey Name	Reference
Cre06.g307500	LCIC,LCIC1	Cre13.g571050		Mackinder et al. 2017

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.020760_1	CLIP2.020760	CDS	80	6.1
CLIP2.020760_2	CLIP2.020760	CDS	80	6.1
CLIP2.027458_1	CLIP2.027458	CDS	80	6.1
CLIP2.027458_2	CLIP2.027458	CDS	80	6.1
CLIP2.036145_1	CLIP2.036145	CDS	80	6.1
CLIP2.036145_2	CLIP2.036145	CDS	80	6.1
CLIP2.038928_1	CLIP2.038928	CDS	80	6.1
CLIP2.038928_2	CLIP2.038928	CDS	80	6.1
CLIP2.041651_2	CLIP2.041651	CDS	80	6.1
CLIP2.041651_3	CLIP2.041651	CDS	80	6.1
LMJ.RY0402.065209_1	LMJ.RY0402.065209	CDS	95	5.5
LMJ.RY0402.065209_2	LMJ.RY0402.065209	CDS	95	5.5
LMJ.RY0402.074161_1	LMJ.RY0402.074161	CDS	73	5.5
LMJ.RY0402.140336_1	LMJ.RY0402.140336	3'UTR	73	5.5
LMJ.RY0402.146272_1	LMJ.RY0402.146272	3'UTR	95	5.5
LMJ.RY0402.146272_2	LMJ.RY0402.146272	3'UTR	95	5.5
LMJ.RY0402.168820_1	LMJ.RY0402.168820	intron	58	5.5
LMJ.RY0402.193466_1	LMJ.RY0402.193466	CDS	73	5.5
LMJ.RY0402.208357_1	LMJ.RY0402.208357	CDS	95	5.5
LMJ.RY0402.208357_2	LMJ.RY0402.208357	CDS	95	5.5
LMJ.RY0402.246520_1	LMJ.RY0402.246520	CDS	73	5.5

Gene Annotations

PFAM:	PF00505, PF01388
PANTHER:	PTHR22970
KEGG_ec:
KEGG_orthology:
KOG:	KOG0381
Gene ontology terms::	GO:0003677
Best arabidopsis TAIR name:	AT1G04880.1
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:	HMG (high mobility group) box protein with ARID/BRIGHT DNA-bindi
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.