Insertion junction: LMJ.RY0402.146272_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.146272
Chromosome:chromosome 13
Location:1289891
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g571050 High mobility group protein; (1 of 1) PF00505//PF01388 - HMG (high mobility group) box (HMG_box) // ARID/BRIGHT DNA binding domain (ARID) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGTTTAACAAGGCCGCGGTCACAACTTG
Internal bar code:CTATACAGCGCTCTGTCGACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:814
LEAP-Seq percent confirming:99.6384
LEAP-Seq n confirming:5236
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGTTGAGGTTCCTGTGG
Suggested primer 2:CTGCTATTCGCCATCCTAGC