Insertion junction: LMJ.RY0402.140336_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.140336
Chromosome:chromosome 13
Location:1290754
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g571050 High mobility group protein; (1 of 1) PF00505//PF01388 - HMG (high mobility group) box (HMG_box) // ARID/BRIGHT DNA binding domain (ARID) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAGGTCGGGATGGTGGTCGCAGAAGTA
Internal bar code:ACGAACGGTCTAGACAGGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:943
LEAP-Seq percent confirming:99.6613
LEAP-Seq n confirming:22657
LEAP-Seq n nonconfirming:77
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:AAGACAAACTGGCACCTTGG
Suggested primer 2:ATCCCAAATGAAGAACTGCG