Insertion junction: CLIP2.027728_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027728
Chromosome:chromosome 12
Location:1353944
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489150 SHD1 SH2-domain protein; (1 of 2) IPR000980 - SH2 domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGAAGGAGCTGCTGCTGGGCTCGGGCTTCACTAAGGGAAGCGGCGGCG
Internal bar code:CCGTGGGTCATGTAAGCTCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3212
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAGGGGCAGCAGGTAAT
Suggested primer 2:CAGGCGGGAAAACAGTTGTG