Insertion junction: CLIP2.027964_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027964
Chromosome:chromosome 2
Location:1634515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085257 COP4,CHR2,CSOB Channelrhodopsin 2; (1 of 1) IPR001425//IPR029730 - Archaeal/bacterial/fungal rhodopsin // Archaeal/bacterial/fungal rhodopsin-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGTTGGAGTGGGCAGGGGACACCGTATGTTACCGGTAGCAACGACTT
Internal bar code:CGGATTGTTTGCGCTTGCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1062
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTACAAGCGGCATCTTCG
Suggested primer 2:AGGGATAGCACTGAGGCAGA