Insertion junction: CLIP2.028013_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028013
Chromosome:chromosome 12
Location:2102745
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510100 ATG4,APG4 Autophagy-related protein; (1 of 1) K08342 - cysteine protease ATG4 (ATG4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATACACGATGGCCCACGGCAGTGGCGCCACACGTGTCAAAGAGTGATCA
Internal bar code:AGAAGACTATACTACAGAGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2273
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGGAGTCAAGTGGAGG
Suggested primer 2:CAATCGCTAGAGACGGGTCC