Insertion junction: CLIP2.028013_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028013
Chromosome:chromosome 12
Location:2102756
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510100 ATG4,APG4 Autophagy-related protein; (1 of 1) K08342 - cysteine protease ATG4 (ATG4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGTGTACCCATTCTAGCACAGGACCGTATGGGTGTCCAGCACGACTAC
Internal bar code:AGAAGACTATACTACAGAGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1798
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAATCGCTAGAGACGGGTCC
Suggested primer 2:CAGCAGGAGTCAAGTGGAGG