Insertion junction: CLIP2.028108_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028108
Chromosome:chromosome 1
Location:5639149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040350 MSH8 putative MutS type 2 DNA repair protein; (1 of 2) PTHR11361//PTHR11361:SF14 - DNA MISMATCH REPAIR MUTS RELATED PROTEINS // DNA MISMATCH REPAIR PROTEIN MUTS2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCACGGCCGCCACAGCCTCGTCGTACTGGGCCTCCTCCTACGCGGCG
Internal bar code:CCAGGTACTTCATAATGTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1714
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGCTGTTGCCTATGCTT
Suggested primer 2:TTTTGCTTCTGCTGCTGCTG