Gene: Cre01.g040350

Overview

Common name:	MSH8
Defline:	putative MutS type 2 DNA repair protein; (1 of 2) PTHR11361//PTHR11361:SF14 - DNA MISMATCH REPAIR MUTS RELATED PROTEINS // DNA MISMATCH REPAIR PROTEIN MUTS2
Description:	Orthologous to AT5G54090 in Arabidopsis thaliana, a DNA mismatch repair protein MutS, type 2; Null-allele passenger mutation was isolated [PMID: 29743196];
Synonyms:	MSH8,g900.t1
Chromosome:	chromosome 1

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.009582_1	CLIP2.009582	intron	80	6.1
CLIP2.009582_2	CLIP2.009582	intron	80	6.1
CLIP2.010344_1	CLIP2.010344	intron	80	6.1
CLIP2.012441_1	CLIP2.012441	intron	80	6.1
CLIP2.012441_2	CLIP2.012441	intron	80	6.1
CLIP2.028108_1	CLIP2.028108	CDS	80	6.1
CLIP2.028108_2	CLIP2.028108	CDS	80	6.1
CLIP2.031355_1	CLIP2.031355	intron	80	6.1
CLIP2.031355_2	CLIP2.031355	intron	80	6.1
CLIP2.033095_1	CLIP2.033095	intron	80	6.1
CLIP2.036478_1	CLIP2.036478	intron	80	6.1
CLIP2.036478_2	CLIP2.036478	intron	80	6.1
LMJ.RY0402.069647_1	LMJ.RY0402.069647	intron	73	5.5
LMJ.RY0402.074128_1	LMJ.RY0402.074128	intron	73	5.5
LMJ.RY0402.075564_1	LMJ.RY0402.075564	CDS	73	5.5
LMJ.RY0402.120764_1	LMJ.RY0402.120764	CDS	73	5.5
LMJ.RY0402.137666_1	LMJ.RY0402.137666	CDS	73	5.5
LMJ.RY0402.163895_1	LMJ.RY0402.163895	intron	95	5.5
LMJ.RY0402.163895_2	LMJ.RY0402.163895	intron	95	5.5
LMJ.RY0402.214170_1	LMJ.RY0402.214170	intron	95	5.5
LMJ.RY0402.214170_2	LMJ.RY0402.214170	CDS/intron	95	5.5
LMJ.RY0402.232184_1	LMJ.RY0402.232184	intron	73	5.5
LMJ.RY0402.251640_1	LMJ.RY0402.251640	intron	73	5.5

Gene Annotations

PFAM:	PF00488
PANTHER:	PTHR11361 PTHR11361:SF14
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::	GO:0004519, GO:0005524, GO:0006298, GO:0016887, GO:0030983, GO:0045910
Best arabidopsis TAIR name:	AT5G54090
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:	DNA mismatch repair protein MutS, type 2
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.