Insertion junction: CLIP2.033095_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033095
Chromosome:chromosome 1
Location:5639380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040350 MSH8 putative MutS type 2 DNA repair protein; (1 of 2) PTHR11361//PTHR11361:SF14 - DNA MISMATCH REPAIR MUTS RELATED PROTEINS // DNA MISMATCH REPAIR PROTEIN MUTS2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTCACGTGCACGTTCGGTGTCGCGCTCAAATGCGGCATGGGAGTAAC
Internal bar code:GCACCCGACCGACTTTACAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2418
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCCTCCTTCTCCTGCT
Suggested primer 2:CTCGCTCCACTTCCAAACCA