Insertion junction: CLIP2.028108_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028108
Chromosome:chromosome 1
Location:5639150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040350 MSH8 putative MutS type 2 DNA repair protein; (1 of 2) PTHR11361//PTHR11361:SF14 - DNA MISMATCH REPAIR MUTS RELATED PROTEINS // DNA MISMATCH REPAIR PROTEIN MUTS2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATCCTGGAGGCCAACACAGCCAGGCGGGCCGCGGCGGCGGCGGCGGC
Internal bar code:TTTGGTATGATTCGTCTACTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2988
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGCTTCTGCTGCTGCTG
Suggested primer 2:ACGAGCTGTTGCCTATGCTT