Insertion junction: CLIP2.028232_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028232
Chromosome:chromosome 2
Location:8062349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g144550 (1 of 4) PTHR10110:SF119 - SODIUM/HYDROGEN EXCHANGER 5-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACCGCACCCGAAAGCGCTAAGCAGCCACCCGCCCACCGGCCGGCCAC
Internal bar code:TCTTACTAATACGGGGGGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4094
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGGGGCTCATCATGAA
Suggested primer 2:ACCATCTGCTCAGGTGCTTC