Insertion junction: CLIP2.028557_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028557
Chromosome:chromosome 6
Location:4063110
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278221 TSSP1,TPS1,TSPSP1 (1 of 1) 2.4.1.15//3.1.3.12 - Alpha,alpha-trehalose-phosphate synthase (UDP-forming) / UDP-glucose--glucose-phosphate glucosyltransferase // Trehalose-phosphatase / Trehalose 6-phosphate phosphatase; Trehalose-6-phosphate synthase/phosphatase, class I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTATAGGATGCACTGAAGGCTGCAGGCGAAGTCGTTACCAAATGAGCG
Internal bar code:GAGTTCTGGGGATGGTACATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:173
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGTGAGGGAGTGGTGAG
Suggested primer 2:TCCATGCAGATCACCAACCC