Insertion junction: CLIP2.028631_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028631
Chromosome:chromosome 13
Location:908540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567750 PRP18 Pre-mRNA splicing factor; (1 of 1) K12817 - pre-mRNA-splicing factor 18 (PRPF18, PRP18) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCTGGAAAATCCACATTATTGAGGGAGGCGTGTTGATTGGTGCTGAC
Internal bar code:TTTGTAATCTCGGAGGTTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1288
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCGCACCTTGTCTTTAT
Suggested primer 2:ACGGCCCCAACATGATTCAT