Insertion junction: CLIP2.029394_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.029394
Chromosome:chromosome 12
Location:9295140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542400 (1 of 1) PTHR11076//PTHR11076:SF34 - DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR
Cre12.g542450 (1 of 1) K18422 - helicase MOV-10 [EC:3.6.4.13] (MOV10); ATP-dependent DNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCACCCCCTCCCCCCGCACCCCCCCCCTGGCCCGCGCGCAATCACA
Internal bar code:AACGGGGCGGACATGGTAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:835
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGGTGCCACCACATTAAT
Suggested primer 2:TGAGGTTGGAGATGCGGAAG