Gene: Cre12.g542400

Overview

Common name:
Defline:(1 of 1) PTHR11076//PTHR11076:SF34 - DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER // SUBFAMILY NOT NAMED
Description:
Synonyms:g13724.t1
Chromosome:chromosome 12

Protein Localization

A plasmid for expressing Cre12.g542400 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g542400-Venus-3xFLAG

Imaged strain: CSI_LW06A1

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.

Classification(s):

chloroplast/homogeneous/pyrenoid depleted

nucleus/nucleoplasm

nucleus/nucleolus

If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.

VenusChlorophyllBright fieldMerged

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.029394_1 CLIP2.029394 3'UTR 80 6.1
CLIP2.029394_2 CLIP2.029394 3'UTR 80 6.1
CLIP2.029928_1 CLIP2.029928 intron 80 6.1
CLIP2.029928_2 CLIP2.029928 intron 80 6.1
CLIP2.041209_1 CLIP2.041209 intron 80 6.1
CLIP2.041209_2 CLIP2.041209 intron 40 6.1
CLIP2.041209_3 CLIP2.041209 intron 80 6.1
CLIP2.043461_1 CLIP2.043461 intron 80 6.1
CLIP2.043461_2 CLIP2.043461 intron 80 6.1
CLIP2.055908_1 CLIP2.055908 3'UTR 80 6.1
CLIP2.065284_1 CLIP2.065284 3'UTR 80 6.1
CLIP2.065284_2 CLIP2.065284 3'UTR 80 6.1
LMJ.RY0402.112768_1 LMJ.RY0402.112768 intron 95 5.5
LMJ.RY0402.112768_2 LMJ.RY0402.112768 intron 95 5.5
LMJ.RY0402.144418_2 LMJ.RY0402.144418 intron 95 5.5
LMJ.RY0402.144418_3 LMJ.RY0402.144418 CDS 95 5.5
LMJ.RY0402.204652_1 LMJ.RY0402.204652 CDS 95 5.5
LMJ.RY0402.204652_2 LMJ.RY0402.204652 CDS 95 5.5
LMJ.RY0402.228378_1 LMJ.RY0402.228378 5'UTR 95 5.5
LMJ.RY0402.228378_2 LMJ.RY0402.228378 5'UTR 95 5.5
LMJ.RY0402.244164_1 LMJ.RY0402.244164 5'UTR 73 5.5
LMJ.RY0402.251514_2 LMJ.RY0402.251514 CDS 73 5.5

Gene Annotations

PFAM:PF13878, PF13880
PANTHER: PTHR11076 PTHR11076:SF34
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:AT4G31400
Best arabidopsis TAIR symbol:CTF7
Best arabidopsis TAIR defline:damaged DNA binding;DNA-directed DNA polymerases
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.