Insertion junction: CLIP2.041209_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041209
Chromosome:chromosome 12
Location:9296775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542400 (1 of 1) PTHR11076//PTHR11076:SF34 - DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCGTAGTCTGAGCCCTACTGGCAGTGGTGGGTGTTGCACGCACCACA
Internal bar code:ATGTTAATCGCTCTAGGTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:764
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTCTGGACTCTGCTGCT
Suggested primer 2:CACTGCAGGTGTTTGTGTGG