Insertion junction: CLIP2.043461_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043461
Chromosome:chromosome 12
Location:9296668
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542400 (1 of 1) PTHR11076//PTHR11076:SF34 - DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGGGGTAGGCACTGCGCAATGCAACGTGCATGGGTTCTTACTTGAGC
Internal bar code:GGGATTTTGGCATCATGTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:678
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACTAGTGCTGGCTCTGG
Suggested primer 2:GTTGTCTGGACTCTGCTGCT