Insertion junction: CLIP2.065284_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065284
Chromosome:chromosome 12
Location:9296249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542400 (1 of 1) PTHR11076//PTHR11076:SF34 - DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTCAAGCGGCCTAGCAACTCATTCGTGGCCCTCAGCGGCCTCCTACC
Internal bar code:AGTTGTAAGTCCTGACATAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:636
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGTTGTGCTTCTGTACT
Suggested primer 2:CGCTTGTTCATGTGCAACCA