Insertion junction: CLIP2.029484_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029484
Chromosome:chromosome 3
Location:1926499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155051 SPA1 Sphinganine-1-phosphate aldolase/lyase; (1 of 1) 4.1.2.27 - Sphinganine-1-phosphate aldolase / Sphingosine-1-phosphate lyase intron
Cre03.g155100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTATCCTTCCGCTTACAATGATGCCAGACAACGGCGGCAAGCTCCGAA
Internal bar code:GCCTGTAAGAGCTGGGGTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4100
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCATCGTCTCCTCCTCGC
Suggested primer 2:GATTGGAGGTGCGATAGGGG