Insertion junction: CLIP2.029500_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029500
Chromosome:chromosome 2
Location:8065002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g144550 (1 of 4) PTHR10110:SF119 - SODIUM/HYDROGEN EXCHANGER 5-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGAACTGTGAGTGTGCTGGCATCAGGTCGTGCGGTGTGGTGGGCCGC
Internal bar code:GTGACTCCGATGGGGGATCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1354
LEAP-Seq percent confirming:83.871
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGAAAGCGTCGCATGAC
Suggested primer 2:GCAACCACTAATAGCGCTGC