Insertion junction: CLIP2.029720_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029720
Chromosome:chromosome 17
Location:3080579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720300 (1 of 6) PTHR27000//PTHR27000:SF160 - FAMILY NOT NAMED // LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGACCATCGTGTTGGCGTCGCTCACCGCCGCCATTGTGCTGCTCATA
Internal bar code:TGCTCGAAAGCGACGTTAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1326
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTGCTTCCTCCCCTACA
Suggested primer 2:GATACGGGCGGCTATTGTGA