Insertion junction: CLIP2.029890_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029890
Chromosome:chromosome 12
Location:1355620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489150 SHD1 SH2-domain protein; (1 of 2) IPR000980 - SH2 domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGAAACAGTTACACCCGACAATTGGCAAGGCTTGCGACGGAACGAAG
Internal bar code:CGTTTTAGACAGGGAGGGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:760
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATAACAACAACAACGGCGGC
Suggested primer 2:CAGGCACGAATGATGATGCG