Insertion junction: CLIP2.029999_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.029999
Chromosome:chromosome 5
Location:3005579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230850 (1 of 1) IPR001374//IPR002110//IPR020683 - R3H domain // Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCACACCACAACACACCATTTCGCCATCGCCCGACTGCCCTGCCTACC
Internal bar code:GATGACTCACTGACTGCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACGGCGCTCTAATGAGG
Suggested primer 2:CCTCGTCATTTAAGCACGCG