Gene: Cre05.g230850
Overview
| Common name: | |
| Defline: | (1 of 1) IPR001374//IPR002110//IPR020683 - R3H domain // Ankyrin repeat // Ankyrin repeat-containing domain |
| Description: | |
| Synonyms: | g5150.t1 |
| Chromosome: | chromosome 5 |
Protein Localization
A plasmid for expressing Cre05.g230850 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre05.g230850-Venus-3xFLAG
Imaged strain: CSI_LW07A4
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
shapes in cytoplasm/one large patch in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre06.g309000 | NAR1B,LCIA | Cre05.g230850 | Mackinder et al. 2017 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.007860_1 | CLIP2.007860 | intron | 80 | 6.1 |
| CLIP2.007860_2 | CLIP2.007860 | intron | 80 | 6.1 |
| CLIP2.025996_1 | CLIP2.025996 | CDS | 80 | 6.1 |
| CLIP2.025996_2 | CLIP2.025996 | CDS | 80 | 6.1 |
| CLIP2.029999_1 | CLIP2.029999 | intron | 80 | 6.1 |
| CLIP2.029999_2 | CLIP2.029999 | intron | 80 | 6.1 |
| CLIP2.034395_1 | CLIP2.034395 | CDS | 80 | 6.1 |
| CLIP2.034395_2 | CLIP2.034395 | CDS | 80 | 6.1 |
| CLIP2.053811_2 | CLIP2.053811 | intron | 80 | 6.1 |
| CLIP2.053811_3 | CLIP2.053811 | intron | 80 | 6.1 |
| LMJ.RY0402.132381_1 | LMJ.RY0402.132381 | intron | 58 | 5.5 |
| LMJ.RY0402.157630_1 | LMJ.RY0402.157630 | intron | 73 | 5.5 |
| LMJ.RY0402.219596_1 | LMJ.RY0402.219596 | CDS | 73 | 5.5 |
| LMJ.RY0402.221590_1 | LMJ.RY0402.221590 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.221590_2 | LMJ.RY0402.221590 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.230188_1 | LMJ.RY0402.230188 | intron | 73 | 5.5 |
Gene Annotations
| PFAM: | PF01424 |
| PANTHER: | |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0003676, GO:0005515 |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.