Insertion junction: CLIP2.034395_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034395
Chromosome:chromosome 5
Location:3006103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230850 (1 of 1) IPR001374//IPR002110//IPR020683 - R3H domain // Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTTGTACAAGTGGGCCCGCGACGCAGGTGGGGGCCCAGGTGGCGTGCG
Internal bar code:GTGCGTGCGAATATTAGTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:872
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGAGCGAATTATGCGGA
Suggested primer 2:ATGGGGGCAAATGGATTCGT