Insertion junction: CLIP2.030262_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030262
Chromosome:chromosome 10
Location:5340592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456851 TMG4 tRNA (guanine-N1)-methyltransferase; (1 of 3) 2.1.1.221 - tRNA (guanine(9)-N(1))-methyltransferase / tRNA m(1)G(9)-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGGGCATAGGGCGGCAGCGAGGAAGTGTCACGGGCATGTGAATGGCA
Internal bar code:ATAAGGGGGAACATGCTTAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2766
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGTGACCATGACACACA
Suggested primer 2:GCACGCTATATGTCTGGCCT