Insertion junction: CLIP2.030319_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030319
Chromosome:chromosome 2
Location:3208585
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g096900 TIE1 (1 of 2) 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease; tRNA-intron endonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGTGCTGTCAACCGCCATCACAACCACCACCACAACCACCATCACTG
Internal bar code:TCACGGGGGCCCGTCGCTTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2833
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCCTTTGCAGCTTTGCT
Suggested primer 2:CCGTGTGTCCTGACTCGAAA