Insertion junction: CLIP2.030750_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030750
Chromosome:chromosome 10
Location:5342053
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456851 TMG4 tRNA (guanine-N1)-methyltransferase; (1 of 3) 2.1.1.221 - tRNA (guanine(9)-N(1))-methyltransferase / tRNA m(1)G(9)-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCACCAGCATCAGCACCACGTGCACATGCCCCCGCGGCCCGTGGAGA
Internal bar code:AGGAGGTGGTTATTTCACCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:991
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTTACAATCACCGCCATGGC
Suggested primer 2:TCTCGATGATGGTCACCCCT