Insertion junction: CLIP2.030811_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030811
Chromosome:chromosome 6
Location:8146203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305900 CPLD22,UAA4 Putative GDP-fucose transporter, conserved in the plant lineage and diatoms; (1 of 3) PTHR11132//PTHR11132:SF64 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGACATCAGCAAGGCAAGCCCTGGGGCCGTGACGTGTGCCTTTCCTGTT
Internal bar code:ACGGGAATATGAACACAGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:678
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCTCCAGGTGGTCATCA
Suggested primer 2:AGCTGGCCACTATGCATTGT