Insertion junction: CLIP2.030825_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030825
Chromosome:chromosome 3
Location:4918726
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178900 PRD1 (1 of 43) IPR011989 - Armadillo-like helical; putative meiotic recombination protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCAGCGGCATCCGCAGCGCCGGCTGTTGCTGCTGAGCCCCGGAGGTG
Internal bar code:TAAGTAATGCGTATCATACGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1195
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGACATGAGGCTTGCGTCAT
Suggested primer 2:CTGCCTACCCCAATGCTGAA