Gene: Cre03.g178900

Overview

Common name:	PRD1
Defline:	(1 of 43) IPR011989 - Armadillo-like helical; putative meiotic recombination protein
Description:	shows similarity to Arabidopsis PRD1, interacting with SPO11-1 to produce double-strand breaks during meiotic recombination
Synonyms:	g3703.t1
Chromosome:	chromosome 3

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.030825_1	CLIP2.030825	CDS	80	6.1
CLIP2.030825_2	CLIP2.030825	CDS	80	6.1
CLIP2.032701_1	CLIP2.032701	CDS	80	6.1
CLIP2.035761_1	CLIP2.035761	CDS	80	6.1
CLIP2.035761_2	CLIP2.035761	CDS	80	6.1
CLIP2.035935_1	CLIP2.035935	CDS	63	6.1
CLIP2.039812_1	CLIP2.039812	CDS	80	6.1
CLIP2.039812_2	CLIP2.039812	CDS	80	6.1
CLIP2.046346_1	CLIP2.046346	CDS	80	6.1
CLIP2.048109_1	CLIP2.048109	CDS	80	6.1
CLIP2.048109_2	CLIP2.048109	CDS	80	6.1
CLIP2.054246_1	CLIP2.054246	intron	80	6.1
CLIP2.054246_2	CLIP2.054246	intron	80	6.1
CLIP2.054544_1	CLIP2.054544	intron	80	6.1
CLIP2.054544_2	CLIP2.054544	intron	80	6.1
LMJ.RY0402.072191_1	LMJ.RY0402.072191	intron	73	5.5
LMJ.RY0402.099881_1	LMJ.RY0402.099881	CDS	95	5.5
LMJ.RY0402.099881_2	LMJ.RY0402.099881	CDS	95	5.5
LMJ.RY0402.125940_1	LMJ.RY0402.125940	CDS	73	5.5
LMJ.RY0402.160064_1	LMJ.RY0402.160064	intron	95	5.5
LMJ.RY0402.160064_2	LMJ.RY0402.160064	intron	95	5.5
LMJ.RY0402.176265_1	LMJ.RY0402.176265	intron	73	5.5
LMJ.RY0402.250431_2	LMJ.RY0402.250431	5'UTR	95	5.5

Gene Annotations

PFAM:
PANTHER:
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

LAT030E11, screen 1 of 1 ( 97% confidence (FDR = 0.025))

LAT041D11, screen 1 of 1 ( 79% confidence (FDR = 0.21))

LAT042B08, screen 1 of 1 ( 93% confidence (FDR = 0.061))

LAT042C03, screen 1 of 1 ( 76% confidence (FDR = 0.24))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.