Insertion junction: CLIP2.054246_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054246
Chromosome:chromosome 3
Location:4921489
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178900 PRD1 (1 of 43) IPR011989 - Armadillo-like helical; putative meiotic recombination protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCGAGAGCCTTGATGCTGTGACTGTAAGTGTACGCTGGTGTCTGGCT
Internal bar code:GTCGCGACCAATATGCGCCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1691
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCACTCATCAGCAGCCA
Suggested primer 2:GGAATGTGTGGTTTGGACGC