Insertion junction: CLIP2.054544_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054544
Chromosome:chromosome 3
Location:4924186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178900 PRD1 (1 of 43) IPR011989 - Armadillo-like helical; putative meiotic recombination protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCGGGTAGCTGCCAGGCCAGGCCGCTGCACCCGCTTCCGTTTCGACG
Internal bar code:TCTATCGTCATTCAAGGAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1152
LEAP-Seq percent confirming:68.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGTATCCCGCGTAGCAA
Suggested primer 2:ATATCACCGAACGCGTCCTC