Insertion junction: CLIP2.054544_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054544
Chromosome:chromosome 3
Location:4924181
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178900 PRD1 (1 of 43) IPR011989 - Armadillo-like helical; putative meiotic recombination protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATACCAGCAGGCTGCGGGGGGCTTCGGTGCTTAGGGAGCGTGTGCTG
Internal bar code:GCGGGTTCAATTTATGGGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2208
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATATCACCGAACGCGTCCTC
Suggested primer 2:GGATGTATCCCGCGTAGCAA