Insertion junction: CLIP2.046346_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046346
Chromosome:chromosome 3
Location:4924016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178900 PRD1 (1 of 43) IPR011989 - Armadillo-like helical; putative meiotic recombination protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGAGGCGGCGGATGGGGACGTCATGAGTCCTGGAGAGCGGCGGGAGC
Internal bar code:GGACCGGGTAGATTCAAGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2123
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGGCACCTCAGGAACAG
Suggested primer 2:GGATGTATCCCGCGTAGCAA