Insertion junction: LMJ.RY0402.099881_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.099881
Chromosome:chromosome 3
Location:4825402
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g178900 PRD1 (1 of 43) IPR011989 - Armadillo-like helical; putative meiotic recombination protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGTAGGGGAGGCGGCGGCGCCGCCGCC
Internal bar code:GATGGGTTGACTGTTTGTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:431
LEAP-Seq percent confirming:99.6292
LEAP-Seq n confirming:5105
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGGTGTCATTCGCTGCTG
Suggested primer 2:ATACGGTGTAGCTGGTGGCT