Insertion junction: CLIP2.048109_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.048109
Chromosome:chromosome 3
Location:4918147
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178900 PRD1 (1 of 43) IPR011989 - Armadillo-like helical; putative meiotic recombination protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGCGCTGAGGAGCGCGCAATCGGCTGTAGCAGCCGCGGCGGCGGCGG
Internal bar code:AAGTCGTACGCGTGCGCATTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:871
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTAGCAGTGGCAGGAACA
Suggested primer 2:CCGCATGATAGCATAGGCCA