Insertion junction: LMJ.RY0402.160064_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.160064
Chromosome:chromosome 3
Location:4832600
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g178900 PRD1 (1 of 43) IPR011989 - Armadillo-like helical; putative meiotic recombination protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACATCACAGCACACGCTCCCTAAGCAC
Internal bar code:AAATGGACGGCCGCAACCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:602
LEAP-Seq percent confirming:69.155
LEAP-Seq n confirming:3020
LEAP-Seq n nonconfirming:1347
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ATTAATGGTACTGCCGTCGC
Suggested primer 2:CACATGCACACCACGACATA