Insertion junction: CLIP2.039812_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039812
Chromosome:chromosome 3
Location:4920848
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178900 PRD1 (1 of 43) IPR011989 - Armadillo-like helical; putative meiotic recombination protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCAGGCAGGCAGCCAGTGCCGCGCCCGCAGCCGCCGCGCCGGCGGCGT
Internal bar code:AGCTATGGCGATCGGAACCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1172
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGTGCTGGAGTTCATGG
Suggested primer 2:CCAGACACCAGCGTACACTT