Insertion junction: CLIP2.030952_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030952
Chromosome:chromosome 14
Location:533636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611450 PLP7,PLAP7 Plastid lipid associated protein 7; (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCCGCAGCGGCTGCTGCTGAGGCCGAGGCCACATCAGAGGCCGAGAC
Internal bar code:ACGGGTGGTCGCTATACACTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1810
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCTGATCGTCAATGGGT
Suggested primer 2:AGCTGAGAAGGAGGAGGAGG