Insertion junction: CLIP2.031010_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.031010
Chromosome:chromosome 4
Location:1138028
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215850 IPA1 Importin alpha; (1 of 1) PF16186 - Atypical Arm repeat (Arm_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATATGAAGCGCAGTCAATACTCACCGGGCGCCAGGTTCTGGTCATCGCC
Internal bar code:TTTGAAGTACGCTAGGGGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4657
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTGTCCTTTTTGCTTCG
Suggested primer 2:CAAATTGGGTGCAAGGGTCG