Gene: Cre04.g215850
Overview
| Common name: | IPA1 |
| Defline: | Importin alpha; (1 of 1) PF16186 - Atypical Arm repeat (Arm_3) |
| Description: | |
| Synonyms: | Cre04.g215850.t1.1,IPA1,g4654.t1 |
| Chromosome: | chromosome 4 |
Protein Localization
A plasmid for expressing Cre04.g215850 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre04.g215850-Venus-3xFLAG
Imaged strain: CSI_LW10D6
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
cytosol/cytosol (strong signal)
nucleus/nucleoplasm
nucleus/nucleolus
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.031010_1 | CLIP2.031010 | intron | 80 | 6.1 |
| CLIP2.031010_2 | CLIP2.031010 | intron | 80 | 6.1 |
| CLIP2.032407_1 | CLIP2.032407 | CDS | 80 | 6.1 |
| CLIP2.032407_2 | CLIP2.032407 | CDS | 80 | 6.1 |
| CLIP2.068076_1 | CLIP2.068076 | 3'UTR | 80 | 6.1 |
| CLIP2.068076_2 | CLIP2.068076 | 3'UTR | 80 | 6.1 |
| CLIP2.071463_1 | CLIP2.071463 | 5'UTR | 80 | 6.1 |
| CLIP2.071463_2 | CLIP2.071463 | 5'UTR | 80 | 6.1 |
| CLIP2.075126_1 | CLIP2.075126 | 3'UTR | 80 | 6.1 |
| CLIP2.075126_2 | CLIP2.075126 | 3'UTR | 80 | 6.1 |
Gene Annotations
| PFAM: | PF00514, PF01749, PF16186 |
| PANTHER: | PTHR23316 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG0166 |
| Gene ontology terms:: | GO:0005488, GO:0005515, GO:0005634, GO:0005737, GO:0006606, GO:0008565 |
| Best arabidopsis TAIR name: | AT3G06720 |
| Best arabidopsis TAIR symbol: | AIMP ALPHA,AT-IMP,ATKAP ALPHA,IMPA-1,IMPA1 |
| Best arabidopsis TAIR defline: | importin alpha isoform 1 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.